| Family | Taxon Name | Authority | Common Name | RDB2 | RDB3 |
|---|
| Elopidae | Elops hawaiiensis | Regan, 1909 | Hawaiian tenpounder | Not Listed | DD |
| Megalopidae | Megalops cyprinoides | (Broussonet, 1782) | Indo-Pacific tarpon | Not Listed | DD |
| Albulidae | Albula argentea | (Forster, 1801) | Longjaw bonefish | Not Listed | DD |
| Muraenidae | Gymnothorax annulatus | Smith & Böhlke, 1997 | Ringed moray | Not Listed | DD |
| Muraenidae | Gymnothorax javanicus | (Bleeker, 1859) | Giant moray | Not Listed | DD |
| Muraenidae | Gymnothorax reevesii | (Richardson, 1845) | Reeve's moray | Not Listed | DD |
| Muraenidae | Gymnothorax tile | (Hamilton, 1822) | Indian mud moray | Not Listed | LC |
| Muraenidae | Strophidon sathete | (Hamilton, 1822) | Slender giant moray | Not Listed | DD |
| Ophichthidae | Scolecenchelys macroptera | (Bleeker, 1857) | Narrow worm-eel | Not Listed | DD |
| Ophichthidae | Ophichthus lithinus | (Jordan & Richardson, 1908) | Evermann's snake-eel | Not Listed | DD |
| Ophichthidae | Pisodonophis boro | (Hamilton, 1822) | Boro snake-eel | Not Listed | DD |
| Ophichthidae | Pisodonophis cancrivorus | (Richardson, 1848) | Longfin snake-eel | Not Listed | DD |
| Muraenesocidae | Muraenesox bagio | (Hamilton, 1822) | Common pike-eel | Not Listed | DD |
| Muraenesocidae | Muraenesox cinereus | (Forsskål, 1775) | Daggertooth pike-eel | Not Listed | DD |
| Congridae | Conger cinereus | Rüppell, 1830 | Ashen conger-eel | Not Listed | DD |
| Clupeidae | Spratelloides delicatulus | (Bennett, 1832) | Delicate round herring | Not Listed | DD |
| Clupeidae | Anodontostoma chacunda | (Hamilton, 1822) | Chacunda gizzard shad | Not Listed | LC |
| Clupeidae | Escualosa thoracata | (Valenciennes, 1847) | White sardine | Not Listed | LC |
| Clupeidae | Herklotsichthys dispilonotus | (Bleeker, 1852) | Blacksaddle herring | Not Listed | LC |
| Clupeidae | Hilsa kelee | (Cuvier, 1829) | Kelee shad | Not Listed | LC |
| Clupeidae | Nematalosa nasus | (Bloch, 1795) | Bloch's gizzard shad | Not Listed | DD |
| Clupeidae | Nematalosa galatheae | Nelson & Rothman, 1973 | Galathea gizzard shad | Not Listed | DD |
| Clupeidae | Sardinella albella | (Valenciennes, 1847) | White sardinella | Not Listed | LC |
| Dussumieriidae | Dussumieria acuta | Valenciennes, 1847 | Rainbow sardine | Not Listed | DD |
| Dussumieriidae | Dussumieria elopsoides | Bleeker, 1849 | Slender rainbow sardine | Not Listed | DD |
| Engraulidae | Coilia dussumieri | Valenciennes, 1848 | Goldspotted grenadier anchovy | Not Listed | DD |
| Engraulidae | Encrasicholina heteroloba | (Rüppell, 1837) | Devis' anchovy | Not Listed | DD |
| Engraulidae | Encrasicholina pseudoheteroloba | (Hardenberg, 1933) | Shorthead anchovy | Not Listed | DD |
| Engraulidae | Setipinna breviceps | (Cantor, 1849) | Shorthead hairfin anchovy | Not Listed | DD |
| Engraulidae | Setipinna taty | (Valenciennes, 1848) | Scaly hairfin anchovy | Not Listed | DD |
| Engraulidae | Stolephorus baganensis | Hardenberg, 1933 | Bagan anchovy | Not Listed | DD |
| Engraulidae | Stolephorus bataviensis | Hardenberg, 1933 | Batavia anchovy | Not Listed | DD |
| Engraulidae | Stolephorus baweanensis | Hardenberg, 1933 | Spotty-face anchovy | Not Listed | DD |
| Engraulidae | Stolephorus bengalensis | (Dutt & Babu Rao, 1959) | Hardenberg's anchovy | Not Listed | DD |
| Engraulidae | Stolephorus commersonnii | Lacepède, 1803 | Commerson's anchovy | Not Listed | LC |
| Engraulidae | Stolephorus indicus | (van Hasselt, 1823) | Indian anchovy | Not Listed | LC |
| Engraulidae | Thrissina dussumieri | (Valenciennes, 1848) | Dussumier's thryssa | Not Listed | LC |
| Engraulidae | Thrissina hamiltonii | Gray, 1835 | Hamilton's thryssa | Not Listed | LC |
| Engraulidae | Thrissina kammalensis | (Bleeker, 1849) | Kammal thryssa | Not Listed | DD |
| Engraulidae | Thrissina mystax | (Bloch & Schneider, 1801) | Moustached thryssa | Not Listed | DD |
| Engraulidae | Thrissina setirostris | (Broussonet, 1782) | Longjaw thryssa | Not Listed | LC |
| Chirocentridae | Chirocentrus dorab | (Forsskål, 1775) | Dorab wolf herring | Not Listed | VU |
| Chirocentridae | Chirocentrus nudus | (Forsskål, 1775) | Dorab wolf herring | Not Listed | DD |
| Pristigasteridae | Ilisha elongata | (Anonymous [Bennett], 1830) | Elongate ilisha | Not Listed | LC |
| Pristigasteridae | Ilisha megaloptera | (Swainson, 1839) | Bigeye ilisha | Not Listed | LC |
| Pristigasteridae | Ilisha indica | (Bloch & Schneider, 1801) | Indian ilisha | Not Listed | LC |
| Pristigasteridae | Opisthopterus tardoore | (Cuvier, 1829) | Longfin shad | Not Listed | DD |
| Pristigasteridae | Pellona ditchela | Valenciennes, 1847 | Toothed shad | Not Listed | DD |
| Pristigasteridae | Raconda russeliana | Gray, 1831 | Raconda | Not Listed | DD |
| Plotosidae | Paraplotosus albilabris | (Valenciennes, 1840) | Whitelipped eel-catfish | Not Listed | LC |
| Plotosidae | Plotosus canius | Hamilton, 1822 | Gray eel-catfish | Not Listed | LC |
| Plotosidae | Plotosus lineatus | (Thunberg, 1787) | Striped eel-catfish | Not Listed | LC |
| Bagridae | Mystus gulio | (Hamilton, 1822) | Long whiskers catfish | Not Listed | LC |
| Bagridae | Mystus wolffii | (Bleeker, 1851) | Wolff's catfish | Not Listed | LC |
| Ariidae | Arius gagora | (Hamilton, 1822) | Gagora catfish | Not Listed | DD |
| Ariidae | Arius leptonotacanthus | Bleeker, 1849 | Smooth-spined catfish | Not Listed | DD |
| Ariidae | Arius oetik | Bleeker, 1846 | Lowly sea catfish | Not Listed | LC |
| Ariidae | Hemiarius sona | (Hamilton, 1822) | Sona sea catfish | Not Listed | LC |
| Ariidae | Hexanematichthys sagor | (Hamilton, 1822) | Sagor catfish | Not Listed | LC |
| Ariidae | Netuma bilineata | (Valenciennes, 1840) | Bronze catfish | Not Listed | DD |
| Ariidae | Netuma thalassina | (Rüppell 1837) | Giant catfish | Not Listed | DD |
| Ariidae | Osteogeneiosus militaris | (Linnaeus, 1758) | Soldier catfish | Not Listed | DD |
| Ariidae | Plicofollis argyropleuron | (Valenciennes, 1840) | Longsnouted catfish | Not Listed | DD |
| Ariidae | Plicofollis nella | (Valenciennes, 1840) | Shieldhead catfish | Not Listed | LC |
| Synodontidae | Saurida micropectoralis | Shindo & Yamada, 1972 | Shortfin lizardfish | Not Listed | VU |
| Bregmacerotidae | Bregmaceros mcclellandi | Thompson, 1840 | Spotted codlet | Not Listed | LC |
| Holocentridae | Sargocentron rubrum | (Forsskål, 1775) | Redcoat | Not Listed | VU |
| Holocentridae | Myripristis hexagona | (Lacepède, 1802) | Doubletooth soldierfish | Not Listed | VU |
| Bythitidae | Ungusurculus riauensis | Schwarzhans & Møller, 2007 | Riau viviparous brotula | Not Listed | LC |
| Batrachoididae | Allenbatrachus reticulatus | (Steindachner, 1870) | Singapore toadfish | Not Listed | LC |
| Batrachoididae | Batrachomoeus trispinosus | (Günther, 1861) | Three-spined toadfish | Not Listed | LC |
| Trichiuridae | Eupleurogrammus glossodon | (Bleeker, 1860) | Longtooth hairtail | Not Listed | DD |
| Trichiuridae | Lepturacanthus savala | (Cuvier, 1829) | Savalai hairtail | Not Listed | DD |
| Trichiuridae | Trichiurus lepturus | Linnaeus, 1758 | Largehead hairtail | Not Listed | DD |
| Scombridae | Rastrelliger brachysoma | (Bleeker, 1851) | Short mackerel | Not Listed | DD |
| Scombridae | Rastrelliger kanagurta | (Cuvier, 1816) | Indian mackerel | Not Listed | DD |
| Scombridae | Scomberomorus commerson | (Lacepède, 1800) | Narrow-barred Spanish mackerel | Not Listed | VU |
| Scombridae | Scomberomorus guttatus | (Bloch & Schneider, 1801) | Indo-Pacific king mackerel | Not Listed | DD |
| Scombridae | Scomberomorus lineolatus | (Cuvier, 1829) | Streaked Spanish mackerel | Not Listed | DD |
| Stromateidae | Pampus argenteus | (Euphrasen, 1788) | White pomfret | Not Listed | DD |
| Stromateidae | Pampus chinensis | (Euphrasen, 1788) | Chinese silver pomfret | Not Listed | DD |
| Fistulariidae | Fistularia petimba | Lacepède, 1803 | Red cornetfish | Not Listed | DD |
| Centriscidae | Aeoliscus strigatus | (Günther, 1861) | Coral shrimpfish | Not Listed | NT |
| Centriscidae | Centriscus scutatus | Linnaeus, 1758 | Grooved razorfish | Not Listed | NT |
| Syngnathidae | Choeroichthys brachysoma | (Bleeker, 1855) | Pacific short-bodied pipefish | Not Listed | DD |
| Syngnathidae | Doryrhamphus janssi | (Herald & Randall, 1972) | Janss' pipefish | Not Listed | VU |
| Syngnathidae | Dunckerocampus dactyliophorus | (Bleeker, 1853) | Ringed pipefish | Not Listed | VU |
| Syngnathidae | Bhanotia fasciolata | (Duméril, 1870) | Corrugated pipefish | Not Listed | DD |
| Syngnathidae | Corythoichthys amplexus | Dawson & Randall, 1975 | Brown-banded pipefish | Not Listed | DD |
| Syngnathidae | Corythoichthys ocellatus | Herald, 1953 | Ocellated pipefish | Not Listed | DD |
| Syngnathidae | Corythoichthys schultzi | Herald, 1953 | Schultz's pipefish | Not Listed | DD |
| Syngnathidae | Halicampus brocki | (Herald, 1953) | Brock's pipefish | Not Listed | DD |
| Syngnathidae | Halicampus nitidus | (Günther, 1873) | Glittering pipefish | Not Listed | DD |
| Syngnathidae | Hippichthys cyanospilos | (Bleeker, 1854) | Bluespeckled pipefish | Not Listed | DD |
| Syngnathidae | Hippichthys heptagonus | Bleeker, 1849 | Reticulated freshwater pipefish | Not Listed | DD |
| Syngnathidae | Hippichthys penicillus | (Cantor, 1849) | Beady pipefish | Not Listed | DD |
| Syngnathidae | Hippichthys spicifer | (Rüppell, 1838) | Barred-belly pipefish | Not Listed | DD |
| Syngnathidae | Hippocampus comes | Cantor, 1849 | Tiger tail seahorse | VU | CR |
| Syngnathidae | Hippocampus kuda | Bleeker, 1852 | Spotted seahorse | VU | CR |
| Syngnathidae | Hippocampus mohnikei | Bleeker, 1853 | Japanese seahorse | Not Listed | CR |
| Syngnathidae | Ichthyocampus carce | (Hamilton, 1822) | Indian freshwater pipefish | Not Listed | VU |
| Syngnathidae | Micrognathus micronopterus | (Fowler, 1938) | Tidepool pipefish | Not Listed | DD |
| Syngnathidae | Phoxocampus belcheri | (Kaup, 1856) | Rock pipefish | Not Listed | DD |
| Syngnathidae | Syngnathoides biaculeatus | (Bloch, 1785) | Alligator pipefish | Not Listed | DD |
| Syngnathidae | Trachyrhamphus bicoarctatus | (Bleeker, 1857) | Double-ended pipefish | Not Listed | DD |
| Syngnathidae | Trachyrhamphus serratus | (Temminck & Schlegel, 1850) | Saw pipefish | Not Listed | DD |
| Pegasidae | Pegasus volitans | Linnaeus, 1758 | Longtail seamoth | Not Listed | LC |
| Pegasidae | Spinipegasus laternarius | Cuvier, 1816 | Brick seamoth | Not Listed | DD |
| Eleotridae | Butis butis | (Hamilton, 1822) | Crimson-tipped gudgeon | Not Listed | NT |
| Eleotridae | Butis humeralis | (Valenciennes, 1837) | Olive flathead-gudgeon | Not Listed | NT |
| Eleotridae | Butis koilomatodon | (Bleeker, 1849) | Mud sleeper | Not Listed | NT |
| Eleotridae | Ophiocara porocephala | (Valenciennes, 1837) | Spangled gudgeon | Not Listed | NT |
| Eleotridae | Oxyeleotris marmorata | (Bleeker, 1852) | Marbled goby | Not Listed | NT |
| Eleotridae | Oxyeleotris urophthalmus | (Bleeker, 1851) | Sinuous gudgeon | Not Listed | NT |
| Gobiidae | Brachygobius kabiliensis | Inger, 1958 | Mangrove bumblebee goby | Not Listed | NT |
| Gobiidae | Brachygobius sabanus | Inger, 1958 | Sabanus bumblebee goby | Not Listed | NT |
| Gobiidae | Eugnathogobius illotus | (Larson, 1999) | Dirtyface brackish-goby | Not Listed | NT |
| Gobiidae | Eugnathogobius polylepis | Wu & Ni, 1985 | Malayan tailring-goby | Not Listed | NT |
| Gobiidae | Eugnathogobius siamensis | (Fowler, 1934) | Siam stream-goby | Not Listed | LC |
| Gobiidae | Eugnathogobius variegatus | (Peters, 1868) | Stripeface goby | Not Listed | NT |
| Gobiidae | Gobiopterus birtwistlei | (Herre, 1935) | Birtwistle's glass-goby | Not Listed | NT |
| Gobiidae | Gobiopterus brachypterus | (Bleeker, 1855) | Greater glass-goby | Not Listed | NT |
| Gobiidae | Gobiopterus panayensis | (Herre, 1944) | Panay glass-goby | Not Listed | NT |
| Gobiidae | Hemigobius hoevenii | (Bleeker, 1851) | Banded mullet-goby | Not Listed | LC |
| Gobiidae | Hemigobius melanurus | (Herre, 1936) | Banded goby | Not Listed | NT |
| Gobiidae | Mugilogobius chulae | (Smith, 1932) | Chulae's goby | Not Listed | LC |
| Gobiidae | Mugilogobius fasciatus | Larson, 2001 | Broad-barred mangrove-goby | Not Listed | NT |
| Gobiidae | Mugilogobius mertoni | (Weber, 1911) | Chequered mangrove-goby | Not Listed | NT |
| Gobiidae | Mugilogobius rambaiae | (Smith, 1945) | Queen of Siam mangrove-goby | Not Listed | NT |
| Gobiidae | Mugilogobius tigrinus | Larson, 2001 | Narrow-barred mangrove-goby | Not Listed | NT |
| Gobiidae | Oxyurichthys auchenolepis | Bleeker, 1876 | Scaly-nape tentacle-goby | Not Listed | NT |
| Gobiidae | Oxyurichthys longicauda | (Steindachner, 1893) | Long-tail tentacle-goby | Not Listed | NT |
| Gobiidae | Oxyurichthys microlepis | (Bleeker, 1849) | Maned goby | Not Listed | NT |
| Gobiidae | Pandaka rouxi | (Weber, 1911) | Roux's pgymy-goby | Not Listed | NT |
| Gobiidae | Pseudogobiopsis oligactis | (Bleeker, 1875) | Bigmouth steam-goby | Not Listed | NT |
| Gobiidae | Pseudogobius avicennia | (Herre, 1940) | Avicennia snubnose-goby | Not Listed | NT |
| Gobiidae | Pseudogobius fulvicaudus | Huang, Shao & Chen, 2014 | Yellowfin snubnose-goby | Not Listed | NT |
| Gobiidae | Pseudogobius masago | (Tomiyama, 1936) | Masago snubnose-goby | Not Listed | NT |
| Gobiidae | Pseudogobius melanosticta | (Day, 1876) | Black-spotted snubnose-goby | Not Listed | NT |
| Gobiidae | Pseudogobius poicilosoma | (Bleeker, 1849) | Spotted snubnose-goby | Not Listed | LC |
| Gobiidae | Pseudogobius verticalis | Larson & Hammer 2021 | Blackline snubnose-goby | Not Listed | NT |
| Gobiidae | Pseudogobius yanamensis | (Rao 1971) | Barfin snubnose-goby | Not Listed | LC |
| Gobiidae | Redigobius bikolanus | (Herre, 1927) | Mangrove bigmouth-goby | Not Listed | LC |
| Gobiidae | Rhinogobius similis | Gill, 1859 | Barcheek river-goby | Not Listed | LC |
| Gobiidae | Stigmatogobius pleurostigma | (Bleeker, 1849) | Peach knight-goby | Not Listed | NT |
| Gobiidae | Stigmatogobius sadanundio | (Hamilton, 1822) | Grey knight-goby | Not Listed | LC |
| Gobiidae | Apocryptodon madurensis | (Bleeker, 1849) | Spotted mudskipper | Not Listed | VU |
| Gobiidae | Boleophthalmus boddarti | (Pallas, 1770) | Blue-spotted mudskipper | Not Listed | VU |
| Gobiidae | Parapocryptes serperaster | (Richardson, 1846) | Serpent mudskipper | Not Listed | VU |
| Gobiidae | Periophthalmodon schlosseri | (Pallas, 1770) | Giant mudskipper | Not Listed | LC |
| Gobiidae | Periophthalmus argentilineatus | Valenciennes, 1837 | Silver-lined mudskipper | Not Listed | VU |
| Gobiidae | Periophthalmus chrysospilos | Bleeker, 1853 | Gold-spotted mudskipper | Not Listed | VU |
| Gobiidae | Periophthalmus gracilis | Eggert, 1935 | Graceful mudskipper | Not Listed | VU |
| Gobiidae | Periophthalmus variabilis | Eggert, 1935 | Dusky-gilled mudskipper | Not Listed | VU |
| Gobiidae | Periophthalmus walailakae | Darumas & Tantichodok, 2002 | Yellow-spotted mudskipper | Not Listed | VU |
| Gobiidae | Pseudapocryptes elongatus | (Cuvier, 1816) | Elongate mudskipper | Not Listed | VU |
| Gobiidae | Scartelaos histophorus | (Valenciennes, 1837) | Bearded mudskipper | Not Listed | VU |
| Gobiidae | Brachyamblyopus brachysoma | (Bleeker, 1854) | Short eel-goby | Not Listed | VU |
| Gobiidae | Paratrypauchen microcephalus | (Bleeker, 1860) | Comb goby | Not Listed | VU |
| Gobiidae | Taenioides gracilis | (Valenciennes, 1837) | Slender eel-goby | Not Listed | DD |
| Gobiidae | Trypauchen pelaeos | Murdy, 2006 | | Not Listed | VU |
| Gobiidae | Trypauchen vagina | (Bloch & Schneider, 1801) | Pink eel-goby | Not Listed | VU |
| Gobiidae | Trypauchenichthys sumatrensis | Hardenberg, 1931 | Sumatran eel-goby | Not Listed | VU |
| Gobiidae | Trypauchenichthys typus | Bleeker, 1860 | Typical eel-goby | Not Listed | VU |
| Gobiidae | Acentrogobius caninus | (Valenciennes, 1837) | Green-shouldered acentrogobius | Not Listed | LC |
| Gobiidae | Acentrogobius cyanomos | (Bleeker, 1849) | Blue-spotted acentrogobius | Not Listed | LC |
| Gobiidae | Acentrogobius janthinopterus | (Bleeker, 1853) | Green-spotted acentrogobius | Not Listed | VU |
| Gobiidae | Acentrogobius viridipunctatus | (Valenciennes, 1837) | Papillose acentrogobius | Not Listed | LC |
| Gobiidae | Amblyeleotris fontanesii | (Bleeker, 1853) | Giant shrimp-goby | Not Listed | VU |
| Gobiidae | Amblyeleotris gymnocephala | (Bleeker, 1853) | Masked shrimp-goby | Not Listed | VU |
| Gobiidae | Amblyeleotris periophthalma | (Bleeker, 1853) | Blotchy shrimp-goby | Not Listed | VU |
| Gobiidae | Amblygobius buanensis | Herre, 1927 | Buan blunthead-goby | Not Listed | NT |
| Gobiidae | Amblygobius phalaena | (Valenciennes, 1837) | Banded blunthead-goby | Not Listed | NT |
| Gobiidae | Amblygobius stethophthalmus | (Bleeker, 1851) | Headstripe blunthead-goby | Not Listed | LC |
| Gobiidae | Amoya gracilis | (Bleeker, 1875) | Slender amoya | Not Listed | NT |
| Gobiidae | Amoya moloanus | (Herre, 1927) | Bar-cheeked amoya | Not Listed | NT |
| Gobiidae | Arcygobius baliurus | (Valenciennes, 1837) | Isthmus goby | Not Listed | VU |
| Gobiidae | Bathygobius fuscus | (Rüppell, 1830) | Dusky frillfin-goby | Not Listed | LC |
| Gobiidae | Bathygobius meggitti | (Hora & Mukerji, 1936) | Meggitt's frillfin-goby | Not Listed | VU |
| Gobiidae | Bryaninops amplus | Larson, 1985 | Large gorgonian-goby | Not Listed | VU |
| Gobiidae | Bryaninops loki | Larson, 1985 | Loki gorgonian-goby | Not Listed | VU |
| Gobiidae | Callogobius hasseltii | (Bleeker, 1851) | Hasselt's goby | Not Listed | VU |
| Gobiidae | Callogobius maculipinnis | (Fowler, 1918) | Ostrich goby | Not Listed | VU |
| Gobiidae | Cryptocentroides insignis | (Seale, 1910) | Crested shrimp-goby | Not Listed | VU |
| Gobiidae | Cryptocentrus caeruleomaculatus | (Herre, 1933) | Blue-speckled shrimp-goby | Not Listed | NT |
| Gobiidae | Cryptocentrus cinctus | (Herre, 1936) | Yellow shrimp-goby | Not Listed | VU |
| Gobiidae | Cryptocentrus cyanospilotus | Allen & Randall, 2011 | Blue-spotted shrimp-goby | Not Listed | VU |
| Gobiidae | Cryptocentrus cyanotaenia | (Bleeker, 1853) | Lagoon shrimp-goby | Not Listed | VU |
| Gobiidae | Cryptocentrus inexplicatus | (Herre, 1934) | Inexplicable shrimp-goby | Not Listed | VU |
| Gobiidae | Cryptocentrus leptocephalus | Bleeker, 1876 | Pink-speckled shrimp-goby | Not Listed | DD |
| Gobiidae | Cryptocentrus maudae | Fowler, 1937 | Saddled shrimp-goby | Not Listed | LC |
| Gobiidae | Cryptocentrus melanopus | (Bleeker, 1860) | Singapore shrimp-goby | Not Listed | LC |
| Gobiidae | Cryptocentrus pavoninoides | (Bleeker, 1849) | Peacock shrimp-goby | Not Listed | VU |
| Gobiidae | Cryptocentrus sericus | Herre, 1932 | Ventral-barred shrimp-goby | Not Listed | LC |
| Gobiidae | Cryptocentrus strigilliceps | (Jordan & Seale, 1906) | Target shrimp-goby | Not Listed | VU |
| Gobiidae | Drombus globiceps | (Hora, 1923) | Kranji drombus | Not Listed | NT |
| Gobiidae | Drombus ocyurus | (Jordan & Seale, 1907) | Blue-marked drombus | Not Listed | NT |
| Gobiidae | Drombus triangularis | (Weber, 1909) | Brown drombus | Not Listed | LC |
| Gobiidae | Eviota queenslandica | Whitley, 1932 | Queensland dwarf-goby | Not Listed | VU |
| Gobiidae | Eviota storthynx | (Rofen, 1959) | Storthynx dwarf-goby | Not Listed | VU |
| Gobiidae | Exyrias belissimus | (Smith, 1959) | Barred highfin-goby | Not Listed | LC |
| Gobiidae | Exyrias puntang | (Bleeker, 1851) | Estuarine highfin-goby | Not Listed | LC |
| Gobiidae | Favonigobius melanobranchus | (Fowler, 1934) | Blackthroat sand-goby | Not Listed | LC |
| Gobiidae | Favonigobius opalescens | (Herre, 1936) | Opalescent sand-goby | Not Listed | NT |
| Gobiidae | Favonigobius reichei | (Bleeker, 1854) | Reiche's sand-goby | Not Listed | LC |
| Gobiidae | Glossogobius aureus | Akihito & Meguro, 1975 | Golden flathead-goby | Not Listed | LC |
| Gobiidae | Glossogobius circumspectus | (Macleay, 1883) | Circumspect flathead-goby | Not Listed | NT |
| Gobiidae | Glossogobius giuris | (Hamilton, 1822) | Bareye flathead-goby | Not Listed | LC |
| Gobiidae | Glossogobius sparsipapillus | Akihito & Meguro, 1976 | Linecheek flathead-goby | Not Listed | NT |
| Gobiidae | Gobiodon heterospilos | Bleeker, 1856 | Head-and-tail spotted acropora-goby | Not Listed | VU |
| Gobiidae | Gobiodon histrio | (Valenciennes, 1837) | Broad-barred acropora-goby | Not Listed | NT |
| Gobiidae | Gobiodon quinquestrigatus | (Valenciennes, 1837) | Five-lined acropora-goby | Not Listed | VU |
| Gobiidae | Gobiopsis macrostomus | Steindachner, 1861 | Bigmouth barbel-goby | Not Listed | VU |
| Gobiidae | Istigobius decoratus | (Herre, 1927) | Decorative lagoon-goby | Not Listed | VU |
| Gobiidae | Istigobius diadema | (Steindachner, 1876) | Black-lined lagoon-goby | Not Listed | VU |
| Gobiidae | Istigobius goldmanni | (Bleeker, 1852) | Goldmann's lagoon-goby | Not Listed | LC |
| Gobiidae | Istigobius ornatus | (Rüppell, 1830) | Ornate lagoon-goby | Not Listed | LC |
| Gobiidae | Lubricogobius ornatus | Fourmanoir, 1966 | Yellow ornate-goby | Not Listed | VU |
| Gobiidae | Macrodontogobius wilburi | Herre, 1936 | Wilbur's goby | Not Listed | VU |
| Gobiidae | Mahidolia mystacina | (Valenciennes, 1837) | Flagfin shrimp-goby | Not Listed | VU |
| Gobiidae | Myersina adonis | Shibukawa & Satapoomin 2006 | Adonis shrimp-goby | Not Listed | VU |
| Gobiidae | Myersina crocata | (Wongratana, 1975) | Yellow-spotted shrimp-goby | Not Listed | VU |
| Gobiidae | Myersina macrostoma | Herre, 1934 | Bigmouth shrimp-goby | Not Listed | VU |
| Gobiidae | Oplopomops diacanthus | (Schultz, 1943) | Hole goby | Not Listed | NT |
| Gobiidae | Oplopomus caninoides | (Bleeker, 1852) | Triplespot goby | Not Listed | NT |
| Gobiidae | Oplopomus oplopomus | (Valenciennes, 1837) | Spine-cheek goby | Not Listed | NT |
| Gobiidae | Parachaeturichthys polynema | (Bleeker, 1853) | Lancet-tail goby | Not Listed | DD |
| Gobiidae | Priolepis nuchifasciata | (Günther, 1873) | Orange reef-goby | Not Listed | NT |
| Gobiidae | Priolepis semidoliata | (Valenciennes, 1837) | Half-barred reef-goby | Not Listed | VU |
| Gobiidae | Psammogobius biocellatus | (Valenciennes, 1837) | Crocodile flathead-goby | Not Listed | NT |
| Gobiidae | Silhouettea nuchipunctata | (Herre, 1934) | Vanishing sand-goby | Not Listed | NT |
| Gobiidae | Tomiyamichthys russus | (Cantor, 1849) | Ocellated shrimp-goby | Not Listed | DD |
| Gobiidae | Valenciennea immaculata | (Ni, 1981) | Red-striped glider-goby | Not Listed | EN |
| Gobiidae | Valenciennea muralis | (Valenciennes, 1837) | Mural glider-goby | Not Listed | EN |
| Gobiidae | Yongeichthys madraspatensis | (Day, 1868) | Manyband goby | Not Listed | VU |
| Gobiidae | Yongeichthys nebulosus | (Forsskål, 1775) | Shadow goby | Not Listed | LC |
| Microdesmidae | Oxymetopon compressus | Chan, 1966 | Robust ribbon-goby | Not Listed | VU |
| Microdesmidae | Parioglossus palustris | (Herre, 1945) | Estuarine dart-goby | Not Listed | EN |
| Microdesmidae | Parioglossus philippinus | (Herre, 1945) | Philippine dart-goby | Not Listed | VU |
| Microdesmidae | Ptereleotris hanae | (Jordan & Snyder, 1901) | Hana dart-goby | Not Listed | VU |
| Microdesmidae | Ptereleotris microlepis | (Bleeker, 1856) | Small-scaled dart-goby | Not Listed | VU |
| Istiophoridae | Istiophorus platypterus | (Shaw, 1792) | Indo-Pacific sailfish | Not Listed | CR |
| Istiophoridae | Istiompax indica | (Cuvier, 1832) | Black marlin | Not Listed | CR |
| Psettodidae | Psettodes erumei | (Bloch & Schneider, 1801) | Indian halibut | Not Listed | DD |
| Paralichthyidae | Pseudorhombus arsius | (Hamilton, 1822) | Largetooth flounder | Not Listed | LC |
| Paralichthyidae | Pseudorhombus elevatus | Ogilby, 1912 | Deep flounder | Not Listed | DD |
| Paralichthyidae | Pseudorhombus javanicus | (Bleeker, 1853) | Javan flounder | Not Listed | DD |
| Paralichthyidae | Pseudorhombus malayanus | Bleeker, 1865 | Malayan flounder | Not Listed | DD |
| Paralichthyidae | Pseudorhombus neglectus | Bleeker, 1865 | | Not Listed | DD |
| Bothidae | Asterorhombus intermedius | (Bleeker, 1865) | Intermediate flounder | Not Listed | DD |
| Bothidae | Engyprosopon grandisquama | (Temminck & Schlegel, 1846) | Largescale flounder | Not Listed | DD |
| Bothidae | Grammatobothus polyophthalmus | (Bleeker, 1865) | Threespot flounder | Not Listed | DD |
| Bothidae | Laeops guentheri | Alcock, 1890 | Günther's flounder | Not Listed | DD |
| Soleidae | Brachirus heterolepis | (Bloch & Schneider, 1801) | Oriental sole | Not Listed | DD |
| Soleidae | Brachirus orientalis | (Bloch & Schneider, 1801) | Oriental sole | Not Listed | DD |
| Soleidae | Dagetichthys commersonii | (Lacepède, 1802) | Commerson's sole | Not Listed | DD |
| Soleidae | Heteromycteris hartzfeldii | (Bleeker, 1853) | Hook-nosed sole | Not Listed | DD |
| Soleidae | Pardachirus pavoninus | (Lacepède, 1802) | Peacock sole | Not Listed | DD |
| Soleidae | Solea ovata | Richardson, 1846 | Ovate sole | Not Listed | DD |
| Soleidae | Zebrias quagga | (Bloch, 1787) | Zebra sole | Not Listed | DD |
| Soleidae | Zebrias zebra | (Bloch, 1787) | Zebra sole | Not Listed | VU |
| Cynoglossidae | Cynoglossus arel | (Bloch & Schneider, 1801) | Largescale sole | Not Listed | DD |
| Cynoglossidae | Cynoglossus bilineatus | (Lacepède, 1802) | Fourlined tonguesole | Not Listed | DD |
| Cynoglossidae | Cynoglossus cynoglossus | (Lacepède, 1802) | Bengal tonguesole | Not Listed | DD |
| Cynoglossidae | Cynoglossus itinus | (Snyder, 1909) | Shortheaded tonguesole | Not Listed | DD |
| Cynoglossidae | Cynoglossus kopsii | (Bleeker, 1851) | Shortheaded tonguesole | Not Listed | DD |
| Cynoglossidae | Cynoglossus lingua | Hamilton, 1822 | Long tonguesole | Not Listed | DD |
| Cynoglossidae | Cynoglossus puncticeps | (Richardson, 1846) | Speckled tonguesole | Not Listed | DD |
| Atherinidae | Atherinomorus lacunosus | (Forster, 1801) | Wide-banded silverside | Not Listed | LC |
| Atherinidae | Doboatherina duodecimalis | (Valenciennes, 1835) | Tropical silverside | Not Listed | LC |
| Atherinidae | Hypoatherina celebesensis | Sasaki & Kimura, 2012 | Sulawesi silverside | Not Listed | DD |
| Atherinidae | Hypoatherina temminckii | (Bleeker, 1854) | Samoan silverside | Not Listed | DD |
| Phallostethidae | Neostethus bicornis | Regan, 1916 | | Not Listed | VU |
| Phallostethidae | Neostethus lankesteri | Regan, 1916 | | Not Listed | EN |
| Belonidae | Strongylura incisa | (Valenciennes, 1846) | Reef needlefish | Not Listed | NT |
| Belonidae | Strongylura leiura | (Bleeker, 1850) | Banded needlefish | Not Listed | NT |
| Belonidae | Strongylura strongylura | (van Hasselt, 1823) | Spottail needlefish | Not Listed | NT |
| Belonidae | Tylosurus crocodilus | (Péron & Lesueur, 1821) | Hound needlefish | Not Listed | NT |
| Hemiramphidae | Hemiramphus far | (Forsskål, 1775) | Black-barred halfbeak | Not Listed | NT |
| Hemiramphidae | Hyporhamphus limbatus | (Valenciennes, 1847) | Congaturi halfbeak | Not Listed | NT |
| Hemiramphidae | Hyporhamphus quoyi | (Valenciennes, 1847) | Quoy's garfish | Not Listed | LC |
| Hemiramphidae | Rhynchorhamphus georgii | (Valenciennes, 1847) | Long billed halfbeak | Not Listed | DD |
| Zenarchopteridae | Zenarchopterus buffonis | (Valenciennes, 1847) | Buffon's river-garfish | Not Listed | LC |
| Zenarchopteridae | Zenarchopterus kneri | Fowler, 1934 | Viviparous halfbeak | Not Listed | DD |
| Exocoetidae | Parexocoetus mento | (Valenciennes, 1847) | African sailfin flyingfish | Not Listed | NT |
| Adrianichthyidae | Oryzias javanicus | (Bleeker, 1854) | Javan ricefish | Not Listed | LC |
| Mugilidae | Chelon melinopterus | (Valenciennes, 1836) | Otomebora mullet | Not Listed | LC |
| Mugilidae | Chelon subviridis | (Valenciennes, 1836) | Greenback mullet | Not Listed | LC |
| Mugilidae | Crenimugil heterocheilus | (Bleeker, 1855) | Half fringelip mullet | Not Listed | DD |
| Mugilidae | Ellochelon vaigiensis | (Quoy & Gaimard, 1825) | Squaretail mullet | Not Listed | LC |
| Mugilidae | Moolgarda perusii | (Valenciennes, 1836) | Longfinned mullet | Not Listed | LC |
| Mugilidae | Moolgarda seheli | (Forsskål, 1775) | Bluespot mullet | Not Listed | LC |
| Mugilidae | Mugil cephalus | Linnaeus, 1758 | Flathead mullet | Not Listed | DD |
| Mugilidae | Planiliza macrolepis | (Smith, 1846) | Largescale mullet | Not Listed | DD |
| Mugilidae | Planiliza tade | (Fabricius, 1775) | Tade gray mullet | Not Listed | DD |
| Mugilidae | Paramugil parmatus | (Cantor, 1849) | Broad-mouthed mullet | Not Listed | DD |
| Gobiesocidae | Diademichthys lineatus | (Sauvage, 1883) | Urchin clingfish | Not Listed | EN |
| Tripterygiidae | Enneapterygius fasciatus | (Weber, 1909) | Banded triplefin | Not Listed | NT |
| Blenniidae | Enchelyurus flavipes | Peters, 1868 | Yellowfin blenny | Not Listed | EN |
| Blenniidae | Laiphognathus multimaculatus | | | Not Listed | DD |
| Blenniidae | Meiacanthus grammistes | (Valenciennes, 1836) | Striped poison-fang blenny | Not Listed | VU |
| Blenniidae | Omobranchus elongatus | (Peters, 1855) | Chevroned blenny | Not Listed | VU |
| Blenniidae | Omobranchus ferox | (Herre, 1927) | Gossamer blenny | Not Listed | VU |
| Blenniidae | Omobranchus germaini | (Sauvage, 1883) | Germain's blenny | Not Listed | VU |
| Blenniidae | Omobranchus punctatus | (Valenciennes, 1836) | Muzzled blenny | Not Listed | VU |
| Blenniidae | Omobranchus smithi | (Rao, 1974) | Smith's blenny | Not Listed | VU |
| Blenniidae | Omobranchus zebra | (Bleeker, 1868) | Zebra blenny | Not Listed | VU |
| Blenniidae | Petroscirtes breviceps | (Valenciennes, 1836) | Short-head sabretooth blenny | Not Listed | DD |
| Blenniidae | Petroscirtes variabilis | Cantor, 1849 | Variable sabretooth blenny | Not Listed | NT |
| Blenniidae | Entomacrodus lighti | (Herre, 1938) | Light's combtooth blenny | Not Listed | DD |
| Blenniidae | Entomacrodus striatus | (Valenciennes, 1836) | Blackspotted rockskipper | Not Listed | DD |
| Blenniidae | Istiblennius dussumieri | (Valenciennes, 1836) | Streaky rockskipper | Not Listed | EN |
| Blenniidae | Parablennius thysanius | (Jordan & Seale, 1907) | Tasseled blenny | Not Listed | DD |
| Blenniidae | Salarias fasciatus | (Bloch, 1786) | Jewelled blenny | Not Listed | EN |
| Antennariidae | Antennatus nummifer | (Cuvier, 1817) | Spotfin frogfish | Not Listed | CR |
| Antennariidae | Lophiocharon trisignatus | (Richardson, 1844) | Three-spot frogfish | Not Listed | EN |
| Triacanthidae | Triacanthus biaculeatus | (Bloch, 1786) | Short-nosed tripodfish | Not Listed | NT |
| Triacanthidae | Tripodichthys blochii | (Bleeker, 1852) | Long-tail tripodfish | Not Listed | NT |
| Triacanthidae | Tripodichthys oxycephalus | (Bleeker, 1851) | Short-tail tripodfish | Not Listed | DD |
| Diodontidae | Diodon hystrix | Linnaeus, 1758 | Spot-fin porcupinefish | Not Listed | VU |
| Diodontidae | Diodon holocanthus | Linnaeus, 1758 | Longspined porcupinefish, | Not Listed | VU |
| Diodontidae | Diodon liturosus | Shaw, 1804 | Black-blothed porcupinefish | Not Listed | VU |
| Tetraodontidae | Arothron caeruleopunctatus | Matsuura, 1994 | Blue-spotted puffer | Not Listed | VU |
| Tetraodontidae | Arothron hispidus | (Linnaeus, 1758) | White-spotted puffer | Not Listed | VU |
| Tetraodontidae | Arothron immaculatus | (Bloch & Schneider, 1801) | Immaculate puffer | Not Listed | VU |
| Tetraodontidae | Arothron mappa | (Lesson, 1831) | Map puffer | Not Listed | VU |
| Tetraodontidae | Arothron reticularis | (Bloch & Schneider, 1801) | Reticulated pufferfish | Not Listed | VU |
| Tetraodontidae | Arothron stellatus | (Anonymous, 1798) | Stellate puffer | Not Listed | VU |
| Tetraodontidae | Chelonodontops patoca | (Hamilton, 1822) | Milkspotted puffer | Not Listed | NT |
| Tetraodontidae | Dichotomyctere nigroviridis | (Marion de Procé, 1822) | Spotted green pufferfish | Not Listed | NT |
| Tetraodontidae | Gastrophysus oblongus | (Bloch, 1786) | Lattice blaasop | Not Listed | NT |
| Tetraodontidae | Lagocephalus lunaris | (Bloch & Schneider, 1801) | Lunartail puffer | Not Listed | NT |
| Ostraciidae | Lactoria cornuta | (Linnaeus, 1758) | Longhorn pufferfish | Not Listed | DD |
| Ostraciidae | Ostracion nasus | (Bloch, 1785) | Shortnose boxfish | Not Listed | VU |
| Ostraciidae | Ostracion rhinorhynchos | Bleeker, 1851 | Horn-nosed boxfish | Not Listed | DD |
| Monacanthidae | Acreichthys tomentosus | (Linnaeus, 1758) | Bristletail filefish | Not Listed | NT |
| Monacanthidae | Aluterus scriptus | (Osbeck, 1765) | Scribbled filefish | Not Listed | CR |
| Monacanthidae | Anacanthus barbatus | Gray, 1830 | Bearded leatherjacket | Not Listed | EN |
| Monacanthidae | Brachaluteres taylori | Woods, 1966 | Taylor's filefish | Not Listed | DD |
| Monacanthidae | Chaetodermis penicilligerus | (Cuvier, 1816) | Leafy filefish | Not Listed | VU |
| Monacanthidae | Monacanthus chinensis | (Osbeck, 1765) | Fan-bellied leatherjacket | Not Listed | LC |
| Monacanthidae | Paramonacanthus choirocephalus | (Bleeker, 1851) | White-blotched filefish | Not Listed | DD |
| Monacanthidae | Pseudomonacanthus macrurus | (Bleeker, 1856) | Strap-weed filefish | Not Listed | VU |
| Monacanthidae | Rudarius excelsus | (Bleeker, 1856) | Diamond leatherjacket | Not Listed | DD |
| Balistidae | Abalistes stellatus | (Bloch & Schneider, 1801) | Starry triggerfish | Not Listed | CR |
| Balistidae | Balistapus undulatus | (Park, 1797) | Orange-lined triggerfish | Not Listed | CR |
| Balistidae | Balistoides viridescens | (Bloch & Schneider, 1801) | Titan triggerfish | Not Listed | CR |
| Apistidae | Apistus carinatus | (Bloch & Schneider, 1801) | Ocellated waspfish | Not Listed | DD |
| Scorpaenidae | Parascorpaena picta | (Cuvier, 1829) | Painted scorpionfish | Not Listed | NT |
| Scorpaenidae | Scorpaenopsis diabolus | (Cuvier, 1829) | False stonefish | Not Listed | DD |
| Scorpaenidae | Scorpaenopsis possi | Randall & Eschmeyer, 2001 | Poss' scorpionfish | Not Listed | DD |
| Scorpaenidae | Scorpaenopsis ramaraoi | Randall & Eschmeyer, 2001 | Rama Rao's scorpionfish | Not Listed | DD |
| Scorpaenidae | Pterois russelii | Bennett, 1831 | Russel's lionfish | Not Listed | CR |
| Scorpaenidae | Pterois volitans | (Linnaeus, 1758) | Red lionfish | Not Listed | CR |
| Tetrarogidae | Cottapistus cottoides | (Linnaeus, 1758) | Marbled stingfish | Not Listed | DD |
| Tetrarogidae | Paracentropogon longispinis | (Cuvier, 1829) | Wispy waspfish | Not Listed | LC |
| Tetrarogidae | Richardsonichthys leucogaster | (Richardson, 1848) | Whiteface waspfish | Not Listed | DD |
| Tetrarogidae | Trichosomus trachinoides | (Cuvier, 1829) | Mangrove goblinfish | Not Listed | DD |
| Synanceiidae | Minous monodactylus | (Bloch & Schneider, 1801) | Grey stingfish | Not Listed | DD |
| Synanceiidae | Inimicus brachyrhynchus | (Bleeker, 1874) | Singapore stinger | Not Listed | DD |
| Synanceiidae | Inimicus cuvieri | (Gray, 1835) | Longsnout stinger | Not Listed | DD |
| Synanceiidae | Inimicus didactylus | (Pallas, 1769) | Bearded ghoulfish | Not Listed | DD |
| Synanceiidae | Leptosynanceia asteroblepa | (Richardson, 1844) | Star-eyed stonefish | Not Listed | DD |
| Synanceiidae | Synanceia horrida | (Linnaeus, 1766) | Estuarine stonefish | Not Listed | NT |
| Synanceiidae | Synanceia verrucosa | (Bloch & Schneider, 1801) | Reef stonefish | Not Listed | VU |
| Synanceiidae | Trachicephalus uranoscopus | (Bloch & Schneider, 1801) | Stargazing stonefish | Not Listed | NT |
| Aploactinidae | Acanthosphex leurynnis | (Jordan & Seale, 1905) | Wasp-spine velvetfish | Not Listed | DD |
| Aploactinidae | Sthenopus mollis | Richardson, 1848 | Soft velvetfish | Not Listed | DD |
| Platycephalidae | Cociella punctata | (Cuvier, 1829) | Spotted flathead | Not Listed | DD |
| Platycephalidae | Cymbacephalus bosschei | (Bleeker, 1860) | Small-eyed flathead | Not Listed | DD |
| Platycephalidae | Cymbacephalus nematophthalmus | (Günther, 1860) | Fringe-eyed flathead | Not Listed | VU |
| Platycephalidae | Elates ransonnetii | (Steindachner, 1876) | Dwarf flathead | Not Listed | VU |
| Platycephalidae | Grammoplites knappi | Imamura & Amaoka, 1994 | Small-spined flathead | Not Listed | DD |
| Platycephalidae | Grammoplites scaber | (Linnaeus, 1758) | Rough flathead | Not Listed | DD |
| Platycephalidae | Inegocia japonica | (Cuvier, 1829) | Japanese flathead | Not Listed | VU |
| Platycephalidae | Platycephalus cultellatus | Richardson, 1846 | Knife flathead | Not Listed | DD |
| Platycephalidae | Platycephalus indicus | (Linnaeus, 1758) | Bartail flathead | Not Listed | VU |
| Platycephalidae | Rogadius tuberculatus | (Cuvier, 1829) | Tuberculated flathead | Not Listed | DD |
| Platycephalidae | Sunagocia carbunculus | (Valenciennes, 1833) | Papillose flathead | Not Listed | VU |
| Terapontidae | Eutherapon theraps | Cuvier, 1829 | Largescaled terapon | Not Listed | LC |
| Terapontidae | Pelates quadrilineatus | (Bloch, 1790) | Fourlined terapon | Not Listed | LC |
| Terapontidae | Pelates sexlineatus | (Quoy & Gaimard, 1825) | Eastern striped grunter | Not Listed | NT |
| Terapontidae | Terapon jarbua | (Forsskål, 1775) | Tiger perch; Jarbua terapon | Not Listed | LC |
| Terapontidae | Terapon puta | Cuvier, 1829 | Small-scaled terapon | Not Listed | NT |
| Kyphosidae | Kyphosus vaigiensis | (Quoy & Gaimard, 1825) | Brassy chub | Not Listed | NT |
| Pempheridae | Pempheris adusta | Bleeker 1877 | Dusky sweeper | Not Listed | EN |
| Pempheridae | Pempheris malabarica | Cuvier, 1831 | Malabar sweeper | Not Listed | EN |
| Pempheridae | Pempheris molucca | Cuvier, 1829 | Moluccan sweeper | Not Listed | EN |
| Ambassidae | Ambassis interrupta | Bleeker, 1853 | Long-spined glass-perchlet | Not Listed | LC |
| Ambassidae | Ambassis kopsii | Bleeker, 1858 | Singapore glass-perchlet | Not Listed | LC |
| Ambassidae | Ambassis nalua | (Hamilton, 1822) | Scalloped glass-perchlet | Not Listed | DD |
| Ambassidae | Ambassis urotaenia | Bleeker 1852 | Banded-tail glass-perchlet | Not Listed | DD |
| Ambassidae | Ambassis vachellii | Richardson, 1846 | Vachelli's glass-perchlet | Not Listed | LC |
| Latidae | Lates calcarifer | (Bloch, 1790) | Asian seabass | Not Listed | DD |
| Latidae | Psammoperca waigiensis | (Cuvier, 1828) | Waigieu seaperch | Not Listed | NT |
| Serranidae | Cephalopholis argus | Schneider. 1801 | Peacock hind | Not Listed | VU |
| Serranidae | Cephalopholis boenak | (Bloch, 1790) | Chocolate hind | Not Listed | LC |
| Serranidae | Cephalopholis formosa | (Shaw, 1812) | Bluelined hind | Not Listed | VU |
| Serranidae | Cephalopholis microprion | (Bleeker, 1852) | Freckled hind | Not Listed | DD |
| Serranidae | Cromileptes altivelis | (Valenciennes, 1828) | Humpback grouper | Not Listed | CR |
| Serranidae | Epinephelus areolatus | (Forsskål, 1775) | Areolate grouper | Not Listed | VU |
| Serranidae | Epinephelus bleekeri | (Vaillant, 1878) | Duskytail grouper | Not Listed | VU |
| Serranidae | Epinephelus coioides | (Hamilton, 1822) | Orange-spotted grouper | Not Listed | VU |
| Serranidae | Epinephelus corallicola | (Valenciennes, 1828) | Coral grouper | Not Listed | EN |
| Serranidae | Epinephelus erythrurus | (Valenciennes, 1828) | Cloudy grouper | Not Listed | VU |
| Serranidae | Epinephelus fasciatus | (Forsskål, 1775) | Blacktip grouper | Not Listed | DD |
| Serranidae | Epinephelus fuscoguttatus | (Forsskål, 1775) | Brown-marbled grouper | Not Listed | VU |
| Serranidae | Epinephelus lanceolatus | (Bloch, 1790) | Giant grouper | Not Listed | DD |
| Serranidae | Epinephelus malabaricus | (Bloch & Schneider, 1801) | Malabar grouper | Not Listed | VU |
| Serranidae | Epinephelus ongus | (Bloch, 1790) | Specklefin grouper | Not Listed | EN |
| Serranidae | Epinephelus quoyanus | (Valenciennes, 1830) | Longfin Grouper | Not Listed | VU |
| Serranidae | Epinephelus sexfasciatus | (Valenciennes, 1828) | Sixbar grouper | Not Listed | DD |
| Serranidae | Plectropomus leopardus | (Lacepède, 1802) | Leopard coral-grouper | Not Listed | EN |
| Serranidae | Plectropomus maculatus | (Bloch, 1790) | Spotted coral-grouper | Not Listed | EN |
| Serranidae | Diploprion bifasciatum | Cuvier, 1828 | Barred soapfish | Not Listed | LC |
| Centrogenyidae | Centrogenys vaigiensis | (Quoy & Gaimard, 1824) | False scorpionfish | Not Listed | LC |
| Pseudochromidae | Pseudochromis ransonneti | Steindachner, 1870 | Karimunjawa dottyback | Not Listed | LC |
| Pseudochromidae | Congrogadus subducens | (Richardson, 1843) | Carpet eel-blenny | Not Listed | LC |
| Plesiopidae | Calloplesiops altivelis | (Steindachner, 1903) | Comet | Not Listed | CR |
| Opistognathidae | Stalix novikovi | Prokofiev, 2015 | Novikov's jawfish | Not Listed | CR |
| Priacanthidae | Priacanthus tayenus | Richardson, 1846 | Purple-spotted bigeye | Not Listed | DD |
| Apogonidae | Apogon crassiceps | Garman, 1903 | Transparent cardinalfish | Not Listed | VU |
| Apogonidae | Apogonichthyoides melas | (Bleeker, 1848) | Black cardinalfish | Not Listed | NT |
| Apogonidae | Apogonichthyoides timorensis | (Bleeker, 1854) | Timor cardinalfish | Not Listed | VU |
| Apogonidae | Archamia bleekeri | (Günther, 1859) | Gon's cardinalfish | Not Listed | NT |
| Apogonidae | Cheilodipterus artus | Smith, 1961 | Wolf cardinalfish | Not Listed | DD |
| Apogonidae | Cheilodipterus macrodon | (Lacepède, 1802) | Large toothed cardinalfish | Not Listed | NT |
| Apogonidae | Cheilodipterus quinquelineatus | Cuvier, 1828 | Five-lined cardinalfish | Not Listed | NT |
| Apogonidae | Cheilodipterus singapurensis | Bleeker, 1860 | Truncate cardinalfish | Not Listed | NT |
| Apogonidae | Fibramia amboinensis | (Bleeker, 1853) | Ambonia cardinalfish | Not Listed | DD |
| Apogonidae | Fibramia lateralis | (Valenciennes, 1832) | Humpback cardinal | Not Listed | NT |
| Apogonidae | Fibramia thermalis | (Cuvier, 1829) | Half-barred cardinal | Not Listed | VU |
| Apogonidae | Fowleria variegata | (Valenciennes, 1832) | Variegated cardinalfish | Not Listed | NT |
| Apogonidae | Jaydia lineata | (Temminck & Schlegel, 1842) | Indian perch | Not Listed | DD |
| Apogonidae | Jaydia truncata | (Bleeker, 1855) | Flagfin cardinalfish | Not Listed | DD |
| Apogonidae | Lepidamia kalosoma | (Bleeker, 1852) | Pinstripe cardinalfish | Not Listed | VU |
| Apogonidae | Nectamia savayensis | (Günther, 1872) | Samoan cardinalfish | Not Listed | EN |
| Apogonidae | Nectamia similis | Fraser, 2008 | Similar cardinalfish | Not Listed | EN |
| Apogonidae | Ostorhinchus cavitensis | (Jordan & Seale, 1907) | Whiteline cardinalfish | Not Listed | VU |
| Apogonidae | Ostorhinchus chrysopomus | (Bleeker, 1854) | Spotted-gill cardinalfish | Not Listed | DD |
| Apogonidae | Ostorhinchus compressus | (Smith & Radcliffe, 1911) | Ochre-striped cardinalfish | Not Listed | NT |
| Apogonidae | Ostorhinchus cookii | (Macleay, 1881) | Cook's cardinalfish | Not Listed | VU |
| Apogonidae | Ostorhinchus cyanosoma | (Bleeker, 1853) | Orange-lined cardinalfish | Not Listed | VU |
| Apogonidae | Ostorhinchus endekataenia | (Bleeker, 1852) | Candystripe cardinalfish | Not Listed | LC |
| Apogonidae | Ostorhinchus fasciatus | (Shaw, 1790) | Broadbanded cardinalfish | Not Listed | DD |
| Apogonidae | Ostorhinchus fleurieu | Lacepède, 1802 | Flower cardinalfish | Not Listed | VU |
| Apogonidae | Ostorhinchus margaritophorus | (Bleeker, 1855) | Red-striped cardinalfish | Not Listed | LC |
| Apogonidae | Ostorhinchus nanus | (Allen, Kuiter & Randall, 1994) | Tiny cardinalfish | Not Listed | DD |
| Apogonidae | Ostorhinchus pleuron | (Fraser, 2005) | Rib-bar cardinalfish | Not Listed | NT |
| Apogonidae | Ostorhinchus urostigma | (Bleeker, 1874) | Spiny-head cardinalfish | Not Listed | DD |
| Apogonidae | Ostorhinchus wassinki | (Bleeker, 1861) | Kupang cardinalfish | Not Listed | VU |
| Apogonidae | Pristicon rhodopterus | Bleeker, 1852) | Redfin cardinalfish | Not Listed | VU |
| Apogonidae | Pristicon trimaculatus | (Cuvier, 1828) | Three-spot cardinalfish | Not Listed | DD |
| Apogonidae | Siphamia tubifer | Weber, 1909 | Tubifer cardinalfish | Not Listed | VU |
| Apogonidae | Sphaeramia nematoptera | (Bleeker, 1856) | Pajama cardinalfish | Not Listed | DD |
| Apogonidae | Sphaeramia orbicularis | (Cuvier, 1828) | Orbiculate cardinalfish | Not Listed | NT |
| Apogonidae | Taeniamia fucata | (Cantor, 1849) | Orangelined cardinalfish | Not Listed | VU |
| Apogonidae | Taeniamia macroptera | (Cuvier, 1828) | Dusky-tailed cardinalfish | Not Listed | DD |
| Apogonidae | Yarica hyalosoma | (Bleeker, 1852) | Humpbacked cardinal | Not Listed | LC |
| Apogonidae | Pseudamia amblyuropterus | (Bleeker, 1856) | White-jawed cardinalfish | Not Listed | DD |
| Sillaginidae | Sillago aeolus | Jordan & Evermann, 1902 | Oriental sillago | Not Listed | LC |
| Sillaginidae | Sillago sihama | (Forsskål, 1775) | Silver sillago | Not Listed | LC |
| Rachycentridae | Rachycentron canadum | (Linnaeus, 1766) | Cobia | Not Listed | NT |
| Echeneidae | Echeneis naucrates | Linnaeus, 1758 | Slender sharksucker | Not Listed | NT |
| Carangidae | Alectis indica | (Rüppell, 1830) | Indian threadfish | Not Listed | NT |
| Carangidae | Alepes djedaba | (Forsskål, 1775) | Shrimp scad | Not Listed | DD |
| Carangidae | Alepes kleinii | (Bloch 1793) | Razorbelly scad | Not Listed | NT |
| Carangidae | Alepes melanoptera | (Swainson, 1839) | Blackfin scad | Not Listed | DD |
| Carangidae | Alepes vari | | | Not Listed | DD |
| Carangidae | Atule mate | (Cuvier, 1833) | Yellowtail scad | Not Listed | VU |
| Carangidae | Carangoides armatus | (Rüppell, 1830) | Longfin trevally | Not Listed | VU |
| Carangidae | Carangoides praeustus | (Anonymous [Bennett], 1830) | Brownback trevally | Not Listed | VU |
| Carangidae | Caranx ignobilis | (Forsskål, 1775) | Giant trevally | Not Listed | EN |
| Carangidae | Caranx melampygus | Cuvier, 1833 | Bluefin trevally | Not Listed | VU |
| Carangidae | Caranx sexfasciatus | Quoy & Gaimard, 1825 | Bieye trevally | Not Listed | EN |
| Carangidae | Decapterus russelli | (Rüppell, 1830) | Indian scad | Not Listed | DD |
| Carangidae | Elagatis bipinnulata | (Quoy & Gaimard, 1825) | Rainbow runner | Not Listed | DD |
| Carangidae | Gnathanodon speciosus | (Forsskål, 1775) | Golden trevally | Not Listed | VU |
| Carangidae | Selaroides leptolepis | (Cuvier, 1833) | Yellowstripe scad | Not Listed | VU |
| Carangidae | Megalaspis cordyla | (Linnaeus, 1758) | Torpedo scad | Not Listed | VU |
| Carangidae | Parastromateus niger | (Bloch, 1795) | Black pomfret | Not Listed | VU |
| Carangidae | Scomberoides commersonnianus | Lacepède, 1801 | Talang queenfish | Not Listed | EN |
| Carangidae | Scomberoides tol | (Cuvier, 1832) | Needle-scaled queenfish | Not Listed | EN |
| Carangidae | Trachinotus blochii | (Lacepède, 1801) | Snubnose pompano | Not Listed | EN |
| Carangidae | Trachinotus mookalee | Cuvier, 1832 | Indian pompano | Not Listed | DD |
| Carangidae | Ulua mentalis | (Cuvier, 1833) | Longrakered trevally | Not Listed | VU |
| Menidae | Mene maculata | (Bloch & Schneider, 1801) | Moonfish | Not Listed | DD |
| Leiognathidae | Aurigequula fasciata | (Lacepède, 1803) | Threadfin ponyfish | Not Listed | DD |
| Leiognathidae | Aurigequula longispina | (Valenciennes, 1835) | Longspine ponyfish | Not Listed | LC |
| Leiognathidae | Leiognathus equula | (Forsskål, 1775) | Common ponyfish | Not Listed | LC |
| Leiognathidae | Leiognathus robustus | Sparks & Dunlap, 2004 | Robust ponyfish | Not Listed | DD |
| Leiognathidae | Leiognathus ruconius | (Hamilton, 1822) | Deep pugnose ponyfish | Not Listed | NT |
| Leiognathidae | Deveximentum hanedai | (Mochizuki & Hayashi, 1989) | Haneda's ponyfish | Not Listed | LC |
| Leiognathidae | Deveximentum insidiator | (Bloch, 1787) | Pugnose ponyfish | Not Listed | LC |
| Leiognathidae | Deveximentum interruptum | (Valenviennes, 1835) | Pig-nosed ponyfish | Not Listed | DD |
| Leiognathidae | Deveximentum megalolepis | (Mochizuki & Hayashi, 1989) | Big-scale ponyfish | Not Listed | DD |
| Leiognathidae | Equulites lineolatus | (Valenciennes, 1835) | Ornate ponyfish | Not Listed | DD |
| Leiognathidae | Eubleekeria jonesi | (James, 1971) | Jones' pony fish | Not Listed | DD |
| Leiognathidae | Eubleekeria splendens | (Cuvier, 1829) | Splendid ponyfish | Not Listed | DD |
| Leiognathidae | Gazza minuta | (Bloch, 1795) | Toothed ponyfish | Not Listed | LC |
| Leiognathidae | Karalla daura | (Cuvier, 1829) | Goldstripe ponyfish | Not Listed | LC |
| Leiognathidae | Karalla dussumieri | (Valenciennes, 1835) | Dussumier's ponyfish | Not Listed | DD |
| Leiognathidae | Nuchequula blochii | (Valenciennes, 1835) | Twoblotch ponyfish | Not Listed | DD |
| Leiognathidae | Nuchequula gerreoides | (Bleeker, 1851) | Decorated ponyfish | Not Listed | DD |
| Leiognathidae | Nuchequula longicornis | Kimura, Kimura & Ikejima, 2008 | Long-horn ponyfish | Not Listed | DD |
| Leiognathidae | Nuchequula mannusella | Chakrabarty & Sparks, 2007 | Saddle ponyfish | Not Listed | DD |
| Leiognathidae | Photolateralis stercorarius | (Evermann & Seale, 1907) | Oblong slipmouth | Not Listed | LC |
| Lutjanidae | Lutjanus argentimaculatus | (Forsskål, 1775) | Mangrove red snapper | Not Listed | NT |
| Lutjanidae | Lutjanus carponotatus | (Richardson, 1842) | Spanish flag snapper | Not Listed | VU |
| Lutjanidae | Lutjanus decussatus | (Cuvier, 1828) | Checkered snapper | Not Listed | EN |
| Lutjanidae | Lutjanus erythropterus | Bloch, 1790 | Crimson snapper | Not Listed | DD |
| Lutjanidae | Lutjanus fulviflamma | (Forsskål, 1775) | Dory snapper | Not Listed | DD |
| Lutjanidae | Lutjanus johnii | (Bloch, 1792) | John's snapper | Not Listed | NT |
| Lutjanidae | Lutjanus lutjanus | Bloch, 1790 | Bigeye snapper | Not Listed | VU |
| Lutjanidae | Lutjanus malabaricus | (Bloch & Schneider, 1801) | Malabar blood snapper | Not Listed | VU |
| Lutjanidae | Lutjanus rivulatus | (Cuvier, 1828) | Blubberlip snapper | Not Listed | DD |
| Lutjanidae | Lutjanus russelli | (Bleeker, 1849) | Russell's snapper | Not Listed | NT |
| Lutjanidae | Lutjanus sebae | (Cuvier, 1816) | Emperor red snapper | Not Listed | CR |
| Lutjanidae | Lutjanus stellatus | Akazaki, 1983 | Star snapper | Not Listed | DD |
| Lutjanidae | Lutjanus vitta | (Quoy & Gaimard, 1824) | Brownstripe red snapper | Not Listed | VU |
| Lutjanidae | Lutjanus xanthopinnis | Iwatsuki, Tanaka & Allen, 2015 | Yellowfin snapper | Not Listed | DD |
| Caesionidae | Caesio caerulaurea | Lacepède, 1801 | Blue and gold fusilier | Not Listed | CR |
| Caesionidae | Caesio cuning | (Bloch, 1791) | Redbelly yellowtail fusilier | Not Listed | LC |
| Lobotidae | Lobotes surinamensis | (Bloch, 1790) | Tripletail | Not Listed | VU |
| Hapalogenyidae | Hapalogenys analis | Richardson, 1845 | Broadbanded velvetchin | Not Listed | CR |
| Gerreidae | Gerres erythrourus | (Bloch, 1791) | Deep-bodied mojarra | Not Listed | NT |
| Gerreidae | Gerres filamentosus | Cuvier, 1829 | Whipfin mojarra | Not Listed | NT |
| Gerreidae | Gerres oyena | (Forsskål, 1775) | Common mojarra | Not Listed | LC |
| Gerreidae | Gerres shima | Iwatsuki, Kimura & Yoshino, 2007 | Banded silver-biddy | Not Listed | DD |
| Gerreidae | Pentaprion longimanus | (Cantor, 1849) | Longfin morjarra | Not Listed | DD |
| Haemulidae | Pomadasys argenteus | (Forsskål, 1775) | Silver grunt | Not Listed | NT |
| Haemulidae | Pomadasys auritus | (Cuvier, 1830) | Longhead grunt | Not Listed | NT |
| Haemulidae | Pomadasys kaakan | (Cuvier, 1830) | Javelin grunt | Not Listed | LC |
| Haemulidae | Pomadasys maculatus | (Bloch, 1793) | Saddle grunt | Not Listed | NT |
| Haemulidae | Pomadasys trifasciatus | Fowler, 1937 | Black-ear grunt | Not Listed | DD |
| Haemulidae | Pomadasys unimaculatus | Tian, 1982 | Red-patched grunt | Not Listed | DD |
| Haemulidae | Diagramma pictum | (Thunberg, 1792) | Painted sweetlips | Not Listed | VU |
| Haemulidae | Plectorhinchus chaetodonoides | Lacepède, 1801 | Harlequin sweetlips | Not Listed | EN |
| Haemulidae | Plectorhinchus chrysotaenia | (Bleeker, 1855) | Yellow-striped sweetlips | Not Listed | EN |
| Haemulidae | Plectorhinchus gibbosus | (Lacepède, 1802) | Brown sweetlips | Not Listed | VU |
| Sparidae | Acanthopagrus pacificus | Iwatsuki, Kume & Yoshino, 2010 | Pikey bream | Not Listed | DD |
| Lethrinidae | Lethrinus lentjan | (Lacepède, 1802) | Pinkear emperor | Not Listed | LC |
| Lethrinidae | Lethrinus nebulosus | (Forsskål, 1775) | Spangled emperor | Not Listed | NT |
| Nemipteridae | Nemipterus nemurus | (Bleeker, 1857) | Redspine threadfin bream | Not Listed | DD |
| Nemipteridae | Nemipterus peronii | (Valenciennes, 1830) | Notchedfin threadfin bream | Not Listed | DD |
| Nemipteridae | Pentapodus bifasciatus | (Bleeker, 1848) | White-shoulder whiptail | Not Listed | VU |
| Nemipteridae | Pentapodus setosus | (Valenciennes, 1830) | Butterfly whiptail | Not Listed | LC |
| Nemipteridae | Pentapodus trivittatus | (Bloch, 1791) | Three-striped whiptail | Not Listed | VU |
| Nemipteridae | Scolopsis bilineata | (Bloch, 1793) | Two-lined monocle bream | Not Listed | VU |
| Nemipteridae | Scolopsis ciliata | (Lacepède, 1802) | Saw-jawed monocle bream | Not Listed | LC |
| Nemipteridae | Scolopsis margaritifera | (Cuvier, 1830) | Pearly monocle bream | Not Listed | VU |
| Nemipteridae | Scolopsis monogramma | (Cuvier, 1830) | Monogrammed monocle bream | Not Listed | LC |
| Nemipteridae | Scolopsis japonica | (Cuvier, 1830) | Lattice monocle bream | Not Listed | VU |
| Nemipteridae | Scolopsis vosmeri | (Bloch, 1792) | Whitecheek monocle bream | Not Listed | NT |
| Sciaenidae | Dendrophysa russelli | (Cuvier, 1829) | Goatee croaker | Not Listed | DD |
| Sciaenidae | Johnius belangerii | (Cuvier, 1830) | Belanger's croaker | Not Listed | NT |
| Sciaenidae | Johnius carouna | (Cuvier, 1830) | Caroun croaker | Not Listed | DD |
| Sciaenidae | Nibea soldado | (Lacepède, 1802) | Soldier croaker | Not Listed | DD |
| Sciaenidae | Otolithes ruber | (Bloch & Schneider, 1801) | Tigetooth croaker | Not Listed | NT |
| Sciaenidae | Otolithoides biauritus | (Cantor, 1849) | Bronze croaker | Not Listed | NT |
| Sciaenidae | Pennahia anea | (Bloch, 1793) | Donkey croaker | Not Listed | DD |
| Sciaenidae | Pseudolarimichthys terengganui | | | Not Listed | DD |
| Sciaenidae | Sciaenops ocellatus | (Linnaeus, 1766) | Red drum | Not Listed | NT |
| Polynemidae | Eleutheronema tetradactylum | (Shaw, 1804) | Fourfinger threadfin | Not Listed | NT |
| Polynemidae | Leptomelanosoma indicum | (Shaw, 1804) | Indian threadfin | Not Listed | DD |
| Polynemidae | Polydactylus sextarius | (Bloch & Schneider, 1801) | Blackspot threadfin | Not Listed | DD |
| Mullidae | Parupeneus cyclostomus | (Lacepède, 1801) | Gold-saddle goatfish | Not Listed | DD |
| Mullidae | Parupeneus heptacanthus | (Lacepède, 1802) | Cinnabar goatfish | Not Listed | DD |
| Mullidae | Upeneus heterospinus | Uiblein & Pavlov, 2019 | Varied-spine goatfish | Not Listed | DD |
| Mullidae | Upeneus sulphureus | Cuvier, 1829 | Sulphur goatfish | Not Listed | DD |
| Mullidae | Upeneus sundaicus | (Bleeker, 1855) | Ochrebanded goatfish | Not Listed | DD |
| Mullidae | Upeneus tragula | Richardson, 1846 | Freckled goatfish | Not Listed | NT |
| Toxotidae | Toxotes chatareus | (Hamilton, 1822) | Spotted archerfish | Not Listed | NT |
| Toxotidae | Toxotes jaculatrix | (Pallas, 1767) | Banded archerfish | Not Listed | LC |
| Drepaneidae | Drepane longimana | (Bloch & Schneider, 1801) | Concertina fish | Not Listed | VU |
| Drepaneidae | Drepane punctata | (Linnaeus, 1758) | Spotted sicklefish | Not Listed | NT |
| Monodactylidae | Monodactylus argenteus | (Linnaeus, 1758) | Silver moony | Not Listed | NT |
| Cepolidae | Acanthocepola abbreviata | (Valenciennes, 1835) | Bandfish | Not Listed | DD |
| Chaetodontidae | Chaetodon adiergastos | Seale, 1910 | Philippine butterflyfish | Not Listed | DD |
| Chaetodontidae | Chaetodon collare | Bloch, 1787 | Redtail butterflyfish | Not Listed | DD |
| Chaetodontidae | Chaetodon kleinii | Bloch, 1790 | Sunburst butterflyfish | Not Listed | DD |
| Chaetodontidae | Chaetodon lunula | (Lacepède, 1802) | Raccoon butterflyfish | Not Listed | DD |
| Chaetodontidae | Chaetodon oligacanthus | (Cuvier, 1831) | Sixspine butteflyfish | Not Listed | VU |
| Chaetodontidae | Chaetodon octofasciatus | Bloch, 1787 | Eightband butterflyfish | Not Listed | NT |
| Chaetodontidae | Chelmon rostratus | (Linnaeus, 1758) | Copperband butterflyfish | Not Listed | LC |
| Chaetodontidae | Coradion chrysozonus | (Cuvier, 1831) | Goldengirdled coralfish | Not Listed | VU |
| Chaetodontidae | Heniochus acuminatus | (Linnaeus, 1758) | Pennant coral fish | Not Listed | CR |
| Chaetodontidae | Heniochus monoceros | Cuvier, 1831 | Masked bannerfish | Not Listed | CR |
| Chaetodontidae | Heniochus varius | (Cuvier, 1829) | Horned bannerfish | Not Listed | CR |
| Pomacanthidae | Chaetodontoplus mesoleucus | (Bloch, 1787) | Vermiculated angelfish | Not Listed | NT |
| Pomacanthidae | Pomacanthus annularis | (Bloch, 1787) | Bluering angelfish | Not Listed | EN |
| Pomacanthidae | Pomacanthus imperator | (Bloch, 1787) | Emperor angelfish | Not Listed | DD |
| Pomacanthidae | Pomacanthus semicirculatus | (Cuvier, 1831) | Semicircle angelfish | Not Listed | DD |
| Pomacanthidae | Pomacanthus sexstriatus | (Cuvier, 1831) | Sixbar angelfish | Not Listed | NT |
| Pomacentridae | Amphiprion clarkii | (Bennett, 1830) | Yellowtail clownfish | VU | CR |
| Pomacentridae | Amphiprion ocellaris | Cuvier, 1830 | Clown anemonefish | VU | NT |
| Pomacentridae | Amphiprion frenatus | Brevoort, 1856 | Tomato clownfish | VU | NT |
| Pomacentridae | Amphiprion perideraion | Bleeker, 1855 | Pink anemonefish | VU | CR |
| Pomacentridae | Amphiprion polymnus | (Linnaeus, 1758) | Saddleback clownfish | VU | DD |
| Pomacentridae | Abudefduf bengalensis | (Bloch, 1787) | Bengal sergeant | Not Listed | LC |
| Pomacentridae | Abudefduf notatus | (Day, 1870) | Dusky damsel; Yellowtail sergeant | Not Listed | DD |
| Pomacentridae | Abudefduf sexfasciatus | (Lacepède, 1801) | Scissortail sergeant | Not Listed | LC |
| Pomacentridae | Abudefduf sordidus | (Forsskål, 1775) | Blackspot sergeant | Not Listed | DD |
| Pomacentridae | Abudefduf vaigiensis | (Quoy & Gaimard, 1825) | Indo-Pacific sergeant | Not Listed | NT |
| Pomacentridae | Amblyglyphidodon curacao | (Bloch, 1787) | Staghorn damselfish | Not Listed | CR |
| Pomacentridae | Chromis atripectoralis | Welander & Schultz, 1951 | Black-axil chromis | Not Listed | DD |
| Pomacentridae | Chromis cinerascens | (Cuvier, 1830) | Green puller | Not Listed | LC |
| Pomacentridae | Chrysiptera parasema | (Fowler, 1918) | Goldtail demoiselle | Not Listed | DD |
| Pomacentridae | Chrysiptera unimaculata | (Cuvier, 1830) | Onespot demoiselle | Not Listed | DD |
| Pomacentridae | Dascyllus aruanus | (Linnaeus, 1758) | Whitetail dascyllus | Not Listed | CR |
| Pomacentridae | Dascyllus trimaculatus | (Rüppell, 1829) | Threespot dascyllus | Not Listed | EN |
| Pomacentridae | Dascyllus reticulatus | (Richardson, 1846) | Reticulate dascyllus | Not Listed | CR |
| Pomacentridae | Dischistodus chrysopoecilus | (Schlegel & Müller, 1839) | White-spot damsel | Not Listed | DD |
| Pomacentridae | Dischistodus fasciatus | (Cuvier, 1830) | Banded damsel | Not Listed | NT |
| Pomacentridae | Dischistodus perspicillatus | (Cuvier, 1830) | White damsel | Not Listed | VU |
| Pomacentridae | Dischistodus prosopotaenia | (Bleeker, 1852) | Honey-head damsel | Not Listed | NT |
| Pomacentridae | Hemiglyphidodon plagiometopon | (Bleeker, 1852) | Lagoon damselfish | Not Listed | VU |
| Pomacentridae | Neoglyphidodon melas | (Cuvier, 1830) | Bowtie damselfish | Not Listed | CR |
| Pomacentridae | Neoglyphidodon nigroris | (Cuvier, 1830) | Black-gold chromis | Not Listed | CR |
| Pomacentridae | Neopomacentrus anabatoides | (Bleeker, 1847) | Silver demoiselle | Not Listed | DD |
| Pomacentridae | Neopomacentrus bankieri | (Richardson, 1846) | Chinese demoiselle | Not Listed | LC |
| Pomacentridae | Neopomacentrus cyanomos | (Bleeker, 1856) | Regal demoiselle | Not Listed | LC |
| Pomacentridae | Neopomacentrus filamentosus | (Macleay, 1882) | Brown demoiselle | Not Listed | LC |
| Pomacentridae | Pomacentrus alexanderae | Evermann & Seale, 1907 | Alexander's damsel | Not Listed | EN |
| Pomacentridae | Pomacentrus bankanensis | Bleeker, 1854 | Speckled damsel | Not Listed | DD |
| Pomacentridae | Pomacentrus cheraphilus | Allen, Erdmann & Hiloman, 2011 | | Not Listed | LC |
| Pomacentridae | Pomacentrus littoralis | Cuvier, 1830 | Smoky damsel | Not Listed | LC |
| Pomacentridae | Pomacentrus moluccensis | Bleeker, 1853 | Lemon damsel | Not Listed | EN |
| Pomacentridae | Pomacentrus simsiang | Bleeker, 1856 | Blueback damsel | Not Listed | VU |
| Pomacentridae | Pomacentrus tripunctatus | Cuvier, 1830 | Threespot damsel | Not Listed | LC |
| Pomacentridae | Stegastes obreptus | (Whitley, 1948) | Western gregory | Not Listed | EN |
| Labridae | Cheilinus chlorourus | (Bloch, 1791) | Floral wrasse | Not Listed | LC |
| Labridae | Cheilinus fasciatus | (Bloch, 1791) | Redbreasted wrasse | Not Listed | EN |
| Labridae | Choerodon anchorago | (Bloch, 1791) | Orange-dotted tuskfish | Not Listed | LC |
| Labridae | Choerodon oligacanthus | (Bleeker, 1851) | White-patch tuskfish | Not Listed | NT |
| Labridae | Choerodon schoenleinii | (Valenciennes, 1839) | Blackspot tuskfish | Not Listed | NT |
| Labridae | Epibulus insidiator | (Pallas, 1770) | Sling-jaw wrasse | Not Listed | VU |
| Labridae | Halichoeres argus | (Bloch & Schneider, 1801) | Argus wrasse | Not Listed | CR |
| Labridae | Halichoeres bicolor | (Bloch & Schneider, 1801) | Pearly-spotted wrasse | Not Listed | LC |
| Labridae | Halichoeres binotopsis | (Bleeker, 1849) | Saowisata wrasse | Not Listed | DD |
| Labridae | Halichoeres chloropterus | (Bloch, 1791) | Pastel-green wrasse | Not Listed | NT |
| Labridae | Halichoeres erdmanni | Randall & Allen, 2010 | Erdmann's wrasse | Not Listed | LC |
| Labridae | Halichoeres kneri | Bleeker, 1862 | Kner's wrasse | Not Listed | NT |
| Labridae | Halichoeres leucurus | (Walbaum, 1792) | Greyhead wrasse | Not Listed | LC |
| Labridae | Halichoeres melanochir | Fowler & Bean, 1928 | Orangefin wrasse | Not Listed | VU |
| Labridae | Halichoeres melanurus | (Bleeker, 1851) | Tail-spot wrasse | Not Listed | VU |
| Labridae | Halichoeres nigrescens | (Bloch & Schneider, 1801) | Bubblefin wrasse | Not Listed | LC |
| Labridae | Hemigymnus melapterus | (Bloch, 1791) | Blackeye thicklip | Not Listed | VU |
| Labridae | Iniistius trivittatus | (Randall & Cornish, 2000) | Three banded razorfish | Not Listed | DD |
| Labridae | Labroides dimidiatus | (Valenciennes, 1839) | Bluestreak cleaner wrasse | Not Listed | CR |
| Labridae | Leptojulis cyanopleura | (Bleeker, 1853) | Shoulder-spot wrasse | Not Listed | NT |
| Labridae | Leptojulis urostigma | Randall, 1996 | Tailmark wrasse | Not Listed | NT |
| Labridae | Oxycheilinus digrammus | (Lacepède, 1801) | Cheeklined wrasse | Not Listed | DD |
| Labridae | Pteragogus flagellifer | (Valenciennes, 1839) | Cocktail wrasse | Not Listed | DD |
| Labridae | Stethojulis interrupta | (Bleeker, 1851) | Cutribbon wrasse | Not Listed | DD |
| Labridae | Thalassoma lunare | (Linnaeus, 1758) | Moon wrasse | Not Listed | CR |
| Scaridae | Scarus ghobban | Forsskål, 1775 | Blue-barred parrotfish | Not Listed | VU |
| Scaridae | Scarus rivulatus | Valenciennes, 1840 | Rivulated parrotfish | Not Listed | VU |
| Scaridae | Scarus schlegeli | (Bleeker, 1861) | Yellowband parrotfish | Not Listed | DD |
| Scaridae | Scarus quoyi | Valenciennes, 1840 | Quoy's parrotfish | Not Listed | VU |
| Uranoscopidae | Ichthyscopus lebeck | (Bloch & Schneider, 1801) | Longnosed stargazer | Not Listed | NT |
| Trichonotidae | Trichonotus setiger | Bloch & Schneider, 1801 | Spotted sand diver | Not Listed | NT |
| Pinguipedidae | Parapercis filamentosa | (Steindachner, 1878) | Threadfin sandperch | Not Listed | DD |
| Pinguipedidae | Parapercis lineopunctata | Randall, 2003 | Nosestripe sandperch | Not Listed | VU |
| Pinguipedidae | Parapercis snyderi | Jordan & Starks, 1905 | U-mark sandperch | Not Listed | VU |
| Pinguipedidae | Parapercis xanthozona | (Bleeker, 1849) | Yellowbar sandperch | Not Listed | NT |
| Callionymidae | Callionymus enneactis | Bleeker, 1879 | Mangrove dragonet | Not Listed | NT |
| Callionymidae | Callionymus erythraeus | Ninni, 1934 | Smallhead dragonet | Not Listed | DD |
| Callionymidae | Callionymus hindsii | Richardson, 1844 | Hinds' dragonet | Not Listed | DD |
| Callionymidae | Callionymus melanotopterus | Bleeker, 1850 | Indonesian flag dragonet | Not Listed | DD |
| Callionymidae | Callionymus sagitta | Pallas, 1770 | Arrow dragonet | Not Listed | DD |
| Callionymidae | Callionymus schaapii | Bleeker, 1852 | Short-snout sand-dragonet | Not Listed | NT |
| Callionymidae | Dactylopus dactylopus | (Valenciennes, 1837) | Fingered dragonet | Not Listed | CR |
| Callionymidae | Dactylopus kuiteri | (Fricke, 1992) | Orange-black dragonet | Not Listed | CR |
| Callionymidae | Synchiropus lineolatus | (Valenciennes, 1837) | Indian ornate dragonet | Not Listed | DD |
| Ephippidae | Ephippus orbis | (Bloch, 1787) | Orbfish | Not Listed | EN |
| Ephippidae | Platax batavianus | Cuvier, 1831 | Humpback batfish | Not Listed | EN |
| Ephippidae | Platax orbicularis | (Forsskål, 1775) | Orbicular batfish | Not Listed | EN |
| Ephippidae | Platax pinnatus | (Linnaeus, 1758) | Dusky batfish | Not Listed | EN |
| Ephippidae | Platax teira | (Forsskål, 1775) | Longfin batfish | Not Listed | EN |
| Ephippidae | Proteracanthus sarissophorus | (Cantor, 1849) | Harpoon spadefish | Not Listed | DD |
| Scatophagidae | Scatophagus argus | (Linnaeus, 1766) | Spotted Scat | Not Listed | LC |
| Siganidae | Siganus canaliculatus | (Park, 1797) | White-spotted spinefoot | Not Listed | NT |
| Siganidae | Siganus corallinus | (Valenciennes, 1835) | Blue-spotted spinefoot | Not Listed | VU |
| Siganidae | Siganus guttatus | (Bloch, 1787) | Orange-spotted spinefoot | Not Listed | NT |
| Siganidae | Siganus javus | (Linnaeus, 1766) | Streaked spinefoot | Not Listed | NT |
| Siganidae | Siganus punctatus | (Schneider & Forster, 1801) | Goldspotted spinefoot | Not Listed | VU |
| Siganidae | Siganus virgatus | (Valenciennes, 1835) | Barhead spinefoot | Not Listed | EN |
| Siganidae | Siganus vulpinus | (Schlegel & Müller, 1845) | Foxface spinefoot | Not Listed | CR |
| Acanthuridae | Acanthurus mata | (Cuvier, 1829) | Elongate Surgeonfish | Not Listed | CR |
| Acanthuridae | Zebrasoma velifer | (Bloch, 1795) | Sailfin tang | Not Listed | DD |
| Sphyraenidae | Sphyraena barracuda | (Edwards, 1771) | Great barracuda | Not Listed | EN |
| Sphyraenidae | Sphyraena jello | Cuvier, 1829 | Pickhandle barracuda | Not Listed | NT |
| Sphyraenidae | Sphyraena obtusata | Cuvier, 1829 | Obtuse barracuda | Not Listed | VU |
| Rhincodontidae | Rhincodon typus | Smith, 1829 | Whale shark | Not Listed | CR |
| Hemiscylliidae | Chiloscyllium griseum | Müller & Henle, 1838 | Grey bambooshark | Not Listed | CR |
| Stegostomatidae | Stegostoma fasciatum | (Hermann, 1783) | Zebra shark | Not Listed | CR |
| Ginglymostomatidae | Nebrius ferrugineus | (Lesson, 1831) | Tawny nurse shark | Not Listed | CR |
| Carcharhinidae | Carcharhinus falciformis | Müller & Henle, 1839 | Silky shark | Not Listed | CR |
| Carcharhinidae | Carcharhinus leucas | Müller & Henle, 1839 | Bull shark | Not Listed | CR |
| Carcharhinidae | Carcharhinus sealei | (Pietschmann, 1913) | Blackspot shark | Not Listed | CR |
| Narkidae | Narke dipterygia | (Bloch & Schneider, 1801) | Spottail sleeper-ray | Not Listed | CR |
| Narcinidae | Narcine maculata | (Shaw, 1804) | Darkfinned numbfish | Not Listed | CR |
| Glaucostegidae | Glaucostegus typus | (Bennett, 1830) | Giant shovelnosed ray | Not Listed | CR |
| Rhinidae | Rhina ancylostoma | Bloch & Schneider, 1801 | Bowmouth guitarfish | Not Listed | CR |
| Rhinidae | Rhynchobatus australiae | Whitley, 1939 | White-spotted wedgefish | Not Listed | CR |
| Rhinidae | Rhynchobatus springeri | Compagno & Last, 2010 | Broadnose wedgefish | Not Listed | CR |
| Pristidae | Pristis pristis | (Linnaeus, 1758) | Largetooth sawfish | Not Listed | CR |
| Dasyatidae | Taeniurops meyeni | (Müller & Henle, 1841) | Round ribbontail-ray | Not Listed | CR |
| Dasyatidae | Himantura uarnak | (Gmelin, 1789) | Reticulate whipray | Not Listed | CR |
| Dasyatidae | Himantura undulata | (Bleeker, 1852) | Honeycomb whipray | Not Listed | CR |
| Dasyatidae | Urogymnus granulatus | (Macleay, 1883) | Whitetail stingray | Not Listed | CR |
| Dasyatidae | Pastinachus ater | (Macleay, 1883) | Broad cowtail-ray | Not Listed | CR |
| Gymnuridae | Gymnura poecilura | (Shaw, 1804) | Longtail butterfly-ray | Not Listed | CR |
| Aetobatidae | Aetobatus ocellatus | (Kuhl, 1823) | Ocellated eagle-ray | Not Listed | CR |
| Rhinopteridae | Rhinoptera javanica | Müller & Henle, 1841 | Javan cownose-ray | Not Listed | CR |
| Mobulidae | Mobula kuhlii | (Müller & Henle, 1841) | Shortfin devil-ray | Not Listed | CR |
| Carcharhinidae | Galeocerdo cuvier | (Péron & Lesueur, 1822) | Tiger shark | Not Listed | DD |
| Narkidae | Temera hardwickii | Gray, 1831 | Finless sleeper-ray | Not Listed | DD |
| Gymnuridae | Gymnura zonura | (Bleeker, 1852) | Zonetail butterfly-ray | Not Listed | DD |
| Myliobatidae | Aetomylaeus nichofii | (Bloch & Schneider, 1801) | Banded eagle-ray | Not Listed | DD |
| Hemiscylliidae | Chiloscyllium indicum | (Gmelin, 1789) | Slender bambooshark | Not Listed | EN |
| Hemiscylliidae | Chiloscyllium plagiosum | (Anonymous [Bennett], 1830) | Whitespotted bambooshark | Not Listed | EN |
| Hemiscylliidae | Chiloscyllium punctatum | Müller & Henle, 1838 | Brownbanded bambooshark | Not Listed | EN |
| Scyliorhinidae | Atelomycterus marmoratus | (Anonymous [Bennett], 1830) | Coral catshark | Not Listed | EN |
| Carcharhinidae | Carcharhinus melanopterus | Quoy & Gaimard, 1824 | Blacktip reef shark | Not Listed | EN |
| Dasyatidae | Telatrygon biasa | Last, White & Naylor, 2016 | Indonesian sharpnose ray | Not Listed | EN |
| Dasyatidae | Maculabatis macrura | (Bleeker, 1852) | Sharpnose whipray | Not Listed | EN |
| Dasyatidae | Neotrygon varidens | Last, White & Serét, 2016 | Mahogany maskray | Not Listed | VU |
| Dasyatidae | Taeniura lymma | (Forsskål, 1775) | Bluespotted fantail-ray | Not Listed | VU |
| Dasyatidae | Brevitrygon heterura | (Bleeker, 1852) | Dwarf whipray | Not Listed | VU |
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